1D4Y date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand TPV BindingDB enzyme
related structures by homologous chain: 1G2K, 1HVJ
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceStructure-based design of HIV protease inhibitors: sulfonamide-containing 5,6-dihydro-4-hydroxy-2-pyrones as non-peptidic inhibitors., Thaisrivongs S, Skulnick HI, Turner SR, Strohbach JW, Tommasi RA, Johnson PD, Aristoff PA, Judge TM, Gammill RB, Morris JK, Romines KR, Chrusciel RA, Hinshaw RR, Chong KT, Tarpley WG, Poppe SM, Slade DE, Lynn JC, Horng MM, Tomich PK, Seest EP, Dolak LA, Howe WJ, Howard GM, Watenpaugh KD, et al., J Med Chem 1996 Oct 25;39(22):4349-53. PMID:8893827
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1d4y.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1D4Y
  • CSU: Contacts of Structural Units for 1D4Y
  • Likely Quarternary Molecular Structure file(s) for 1D4Y
  • Retrieve 1D4Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1D4Y from S2C, [Save to disk]
  • View 1D4Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1d4y] [1d4y_A] [1d4y_B]
  • SWISS-PROT database: [P03367]

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