1DB1		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	VDX	enzyme
note	1DB1 (Molecule of the Month:pdb155)
related structures	by homologous chain: 1IE8, 1TXI
Gene Ontology	Chain Function Process Component A
Primary reference	The crystal structure of the nuclear receptor for vitamin D bound to its natural ligand., Rochel N, Wurtz JM, Mitschler A, Klaholz B, Moras D, Mol Cell 2000 Jan;5(1):173-9. PMID:10678179

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (1db1.pdb1.gz) 44 Kb LPC: Ligand-Protein Contacts for 1DB1 CSU: Contacts of Structural Units for 1DB1 Likely Quarternary Molecular Structure file(s) for 1DB1 Structure Factors (246 Kb) Retrieve 1DB1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DB1 from S2C, [Save to disk] Re-refined 1db1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1DB1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1db1] [1db1_A] SWISS-PROT database: [P11473] Belongs to the vitamin d3 receptor (vdr) family according to TCDB. Domain found in 1DB1: [HOLI ] by SMART

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