1DE8 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 3DR enzyme
related structures by homologous chain: 1DE9, 1DEW
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceDNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination [corrected], Mol CD, Izumi T, Mitra S, Tainer JA, Nature 2000 Jan 27;403(6768):451-6. PMID:10667800
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (1de8.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (1de8.pdb2.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 1DE8
  • CSU: Contacts of Structural Units for 1DE8
  • Likely Quarternary Molecular Structure file(s) for 1DE8
  • Retrieve 1DE8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DE8 from S2C, [Save to disk]
  • View 1DE8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1de8] [1de8_A] [1de8_B] [1de8_U] [1de8_V] [1de8_X] [1de8_Y]
  • SWISS-PROT database: [P27695]

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