OCA Atlas for 1DMK

1DMK

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ACT, AP6, CAC, HEM, ITU, ZN BindingDB

enzyme

related structures

by homologous chain: 1NSE, 1P6I

Gene
Ontology

Chain	Function	Process	Component
A, B

Primary reference

Structural basis for pterin antagonism in nitric-oxide synthase. Development of novel 4-oxo-pteridine antagonists of (6R)-5,6,7,8-tetrahydrobiopterin., Kotsonis P, Frohlich LG, Raman CS, Li H, Berg M, Gerwig R, Groehn V, Kang Y, Al-Masoudi N, Taghavi-Moghadam S, Mohr D, Munch U, Schnabel J, Martasek P, Masters BS, Strobel H, Poulos T, Matter H, Pfleiderer W, Schmidt HH, J Biol Chem 2001 Dec 28;276(52):49133-41. PMID:11590164

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]

Biological Unit Coordinates (1dmk.pdb1.gz) 145 Kb

LPC: Ligand-Protein Contacts for 1DMK

CSU: Contacts of Structural Units for 1DMK

Likely Quarternary Molecular Structure file(s) for 1DMK

Structure Factors (659 Kb)

Retrieve 1DMK in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1DMK from S2C, [Save to disk]

Re-refined 1dmk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1DMK in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1dmk] [1dmk_A] [1dmk_B]

SWISS-PROT database: [P29473]

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