1DV3 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BCL, BPH, CD, CL, FE2, LDA, U10 enzyme
related structures by homologous chain: 1DS8, 2BNS
Gene
Ontology
ChainFunctionProcessComponent
H, T
  • electron transporter, transf...


    • M, S


    R, L


    Primary referenceDetermination of the binding sites of the proton transfer inhibitors Cd2+ and Zn2+ in bacterial reaction centers., Axelrod HL, Abresch EC, Paddock ML, Okamura MY, Feher G, Proc Natl Acad Sci U S A 2000 Feb 15;97(4):1542-7. PMID:10677497
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (294 Kb) [Save to disk]
  • Biological Unit Coordinates (1dv3.pdb1.gz) 145 Kb
  • Biological Unit Coordinates (1dv3.pdb2.gz) 142 Kb
  • LPC: Ligand-Protein Contacts for 1DV3
  • CSU: Contacts of Structural Units for 1DV3
  • Likely Quarternary Molecular Structure file(s) for 1DV3
  • Structure Factors (725 Kb)
  • Retrieve 1DV3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DV3 from S2C, [Save to disk]
  • Re-refined 1dv3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1DV3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dv3] [1dv3_H] [1dv3_L] [1dv3_M] [1dv3_R] [1dv3_S] [1dv3_T]
  • SWISS-PROT database: [P0C0Y7] [P0C0Y8] [P0C0Y9]
  • Belongs to the photosynthetic reaction center (prc) family according to TCDB.

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