1DVB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FE, ZN enzyme
related structures by homologous chain: 1B71, 1S30
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe 1.9 A crystal structure of the "as isolated" rubrerythrin from Desulfovibrio vulgaris: some surprising results., Sieker LC, Holmes M, Le Trong I, Turley S, Liu MY, LeGall J, Stenkamp RE, J Biol Inorg Chem 2000 Aug;5(4):505-13. PMID:10968622
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (1dvb.pdb1.gz) 70 Kb
  • Biological Unit Coordinates (1dvb.pdb2.gz) 138 Kb
  • LPC: Ligand-Protein Contacts for 1DVB
  • CSU: Contacts of Structural Units for 1DVB
  • Likely Quarternary Molecular Structure file(s) for 1DVB
  • Structure Factors (136 Kb)
  • Retrieve 1DVB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DVB from S2C, [Save to disk]
  • Re-refined 1dvb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1DVB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dvb] [1dvb_A]
  • SWISS-PROT database: [P24931]

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