1FD3 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
note 1FD3 is a representative structure
related structures by homologous chain: 1FD4
Gene
Ontology
ChainFunctionProcessComponent
A, D, B, C
  • chemoattractant activity


    • Primary referenceThe structure of human beta-defensin-2 shows evidence of higher order oligomerization., Hoover DM, Rajashankar KR, Blumenthal R, Puri A, Oppenheim JJ, Chertov O, Lubkowski J, J Biol Chem 2000 Oct 20;275(42):32911-8. PMID:10906336
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (1fd3.pdb1.gz) 30 Kb
  • Biological Unit Coordinates (1fd3.pdb2.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 1FD3
  • CSU: Contacts of Structural Units for 1FD3
  • Likely Quarternary Molecular Structure file(s) for 1FD3
  • Structure Factors (197 Kb)
  • Retrieve 1FD3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FD3 from S2C, [Save to disk]
  • Re-refined 1fd3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1FD3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fd3] [1fd3_A] [1fd3_B] [1fd3_C] [1fd3_D]
  • SWISS-PROT database: [O15263]
  • Belongs to the pore-forming -defensin (-defensin) family according to TCDB.
  • Domain found in 1FD3: [DEFSN ] by SMART

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