1GD3 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1GD4, 1N9J
Gene
Ontology
ChainFunctionProcessComponent
A
  • endopeptidase inhibitor acti...
  • cysteine-type endopeptidase ...


  • Primary referenceStructural comparison between wild-type and P25S human cystatin A by NMR spectroscopy. Does this mutation affect the alpha-helix conformation?, Shimba N, Kariya E, Tate S, Kaji H, Kainosho M, J Struct Funct Genomics 2000;1(1):26-42. PMID:12836678
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (1gd3.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 1GD3
  • Original NMR restraints for 1GD3 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1GD3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GD3 from S2C, [Save to disk]
  • View 1GD3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gd3] [1gd3_A]
  • SWISS-PROT database: [P01040]
  • Domain found in 1GD3: [CY ] by SMART

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