OCA Atlas for 1GTF

1GTF

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

TRP

enzyme

related structures

by homologous chain: 1WAP

Gene
Ontology

Chain	Function	Process	Component
V, O, H, T, I, U, S, Q, P, J, R, A, M, E, C, L, D, B, F, K, G, N

Primary reference

Specificity of TRAP-RNA interactions: crystal structures of two complexes with different RNA sequences., Hopcroft NH, Wendt AL, Gollnick P, Antson AA, Acta Crystallogr D Biol Crystallogr 2002 Apr;58(Pt 4):615-21. PMID:11914485

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (296 Kb) [Save to disk]

Biological Unit Coordinates (1gtf.pdb1.gz) 134 Kb

Biological Unit Coordinates (1gtf.pdb2.gz) 154 Kb

LPC: Ligand-Protein Contacts for 1GTF

CSU: Contacts of Structural Units for 1GTF

Likely Quarternary Molecular Structure file(s) for 1GTF

Structure Factors (1687 Kb)

Retrieve 1GTF in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1GTF from S2C, [Save to disk]

Re-refined 1gtf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1GTF in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1gtf_A] [1gtf_B] [1gtf_D] [1gtf_C] [1gtf_E] [1gtf_F] [1gtf_S] [1gtf_R] [1gtf_T] [1gtf_U] [1gtf_V] [1gtf_W] [1gtf] [1gtf_G] [1gtf_H] [1gtf_I] [1gtf_J] [1gtf_K] [1gtf_L] [1gtf_M] [1gtf_N] [1gtf_O] [1gtf_P] [1gtf_Q]

SWISS-PROT database: [Q9X6J6]

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]