1GVJ Transcription date Feb 14, 2002
title Ets-1 Dna Binding And Autoinhibitory Domains
authors T.H.Tahirov, K.Ogata
compound source
Molecule: C-Ets-1 Protein
Chain: A, B
Fragment: Residues 297-441
Synonym: P54
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Par2156
symmetry Space Group: P 1
R_factor 0.208 R_Free 0.235
length a length b length c angle alpha angle beta angle gamma
40.475 42.842 49.771 115.25 97.30 102.40
method X-Ray Diffractionresolution 1.53 Å
related structures by homologous chain: 1MD0
A, B

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1gvj.pdb1.gz) 53 Kb
  • CSU: Contacts of Structural Units for 1GVJ
  • Likely Quarternary Molecular Structure file(s) for 1GVJ
  • Structure Factors (442 Kb)
  • Retrieve 1GVJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GVJ from S2C, [Save to disk]
  • Re-refined 1gvj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1GVJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1GVJ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1GVJ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gvja_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1gvjb_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1gvj from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gvj_A] [1gvj_B] [1gvj]
  • SWISS-PROT database: [P14921]
  • Domain organization of [ETS1_HUMAN] by SWISSPFAM
  • Domain found in 1GVJ: [ETS ] by SMART
  • Other resources with information on 1GVJ
  • Community annotation for 1GVJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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