1IP0 Hormone Growth Factor date Apr 19, 2001
title Nmr Structure Of Human Betacellulin-2
authors K.Miura, H.Doura, T.Aizawa, H.Tada, M.Seno, H.Yamada, K.Kawano
compound source
Molecule: Betacellulin
Chain: A
Fragment: Residues 62-111
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbo41
methodSolution NMR
related structures by homologous chain: 1IOX
Primary referenceSolution structure of betacellulin, a new member of EGF-family ligands., Miura K, Doura H, Aizawa T, Tada H, Seno M, Yamada H, Kawano K, Biochem Biophys Res Commun 2002 Jun 28;294(5):1040-6. PMID:12074582
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (18 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1IP0
  • Original NMR restraints for 1IP0 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1IP0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IP0 from S2C, [Save to disk]
  • View 1IP0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IP0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1IP0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ip0a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1ip0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ip0] [1ip0_A]
  • SWISS-PROT database: [P35070]
  • Domain organization of [BTC_HUMAN] by SWISSPFAM
  • Domain found in 1IP0: [EGF ] by SMART
  • Other resources with information on 1IP0
  • Community annotation for 1IP0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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