1ITO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand E6C BindingDB enzyme
related structures by homologous chain: 1CPJ, 3PBH
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for development of cathepsin B-specific noncovalent-type inhibitor: crystal structure of cathepsin B-E64c complex., Yamamoto A, Tomoo K, Matsugi K, Hara T, In Y, Murata M, Kitamura K, Ishida T, Biochim Biophys Acta 2002 Jun 3;1597(2):244-51. PMID:12044902
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (1ito.pdb1.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 1ITO
  • CSU: Contacts of Structural Units for 1ITO
  • Likely Quarternary Molecular Structure file(s) for 1ITO
  • Retrieve 1ITO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ITO from S2C, [Save to disk]
  • View 1ITO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ito] [1ito_A]
  • SWISS-PROT database: [P07688]
  • Domain found in 1ITO: [Pept_C1 ] by SMART

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