1IXA Human Factor Ix date Nov 14, 1991
title The Three-Dimensional Structure Of The First Egf-Like Module Of Human Factor Ix: Comparison With Egf And Tgf-A
authors M.Baron, D.G.Norman, T.S.Harvey, P.A.Hanford, M.Mayhew, A.G.D.Tse, G.G.Brownlee, I.D.C.Campbell
compound source
Molecule: Egf-Like Module Of Human Factor Ix
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
related structures by homologous chain: 1BF9, 1CCF, 1F7E
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe three-dimensional structure of the first EGF-like module of human factor IX: comparison with EGF and TGF-alpha., Baron M, Norman DG, Harvey TS, Handford PA, Mayhew M, Tse AG, Brownlee GG, Campbell ID, Protein Sci 1992 Jan;1(1):81-90. PMID:1304885
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1IXA
  • Retrieve 1IXA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IXA from S2C, [Save to disk]
  • View 1IXA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IXA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1IXA, from MSDmotif at EBI
  • Genome occurence of 1IXA's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ixa__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1ixa from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ixa] [1ixa_A]
  • SWISS-PROT database: [P00740]
  • Domain organization of [FA9_HUMAN] by SWISSPFAM
  • Domain found in 1IXA: [EGF_CA ] by SMART
  • Other resources with information on 1IXA
  • Community annotation for 1IXA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1IXA from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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