OCA Atlas for 1J1X

1J1X

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

related structures

by homologous chain: 1J1O, 1RUA, 1UAC

Gene
Ontology

Chain	Function	Process	Component
H
L
Y

Primary reference

The role of hydrogen bonding via interfacial water molecules in antigen-antibody complexation. The HyHEL-10-HEL interaction., Yokota A, Tsumoto K, Shiroishi M, Kondo H, Kumagai I, J Biol Chem 2003 Feb 14;278(7):5410-8. Epub 2002 Nov 19. PMID:12444085

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]

Biological Unit Coordinates (1j1x.pdb1.gz) 61 Kb

CSU: Contacts of Structural Units for 1J1X

Likely Quarternary Molecular Structure file(s) for 1J1X

Structure Factors (287 Kb)

Retrieve 1J1X in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1J1X from S2C, [Save to disk]

Re-refined 1j1x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1J1X in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1j1x] [1j1x_H] [1j1x_L] [1j1x_Y]

SWISS-PROT database: [P01823] [P01642] [P00698]

Domains found in 1J1X: [IGv] [LYZ1 ] by SMART

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