OCA Atlas for 1J42

1J42

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

related structures

by homologous chain: 1PDW

Gene
Ontology

Chain	Function	Process	Component
A	transcription coactivator ac... peroxiredoxin activity glyoxalase (glycolic acid-fo...	synaptic transmission, dopam... negative regulation of prote... positive regulation of pepti... dopamine uptake involved in ... positive regulation of L-dop...

Primary reference

Crystal structures of human DJ-1 and Escherichia coli Hsp31, which share an evolutionarily conserved domain., Lee SJ, Kim SJ, Kim IK, Ko J, Jeong CS, Kim GH, Park C, Kang SO, Suh PG, Lee HS, Cha SS, J Biol Chem 2003 Nov 7;278(45):44552-9. Epub 2003 Aug 25. PMID:12939276

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk]

Biological Unit Coordinates (1j42.pdb1.gz) 23 Kb

Biological Unit Coordinates (1j42.pdb2.gz) 46 Kb

CSU: Contacts of Structural Units for 1J42

Likely Quarternary Molecular Structure file(s) for 1J42

Structure Factors (123 Kb)

Retrieve 1J42 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1J42 from S2C, [Save to disk]

Re-refined 1j42 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1J42 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1j42] [1j42_A]

SWISS-PROT database: [Q99497]

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