1J8D		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, MSE	enzyme
related structures	by homologous chain: 1K1E
Gene Ontology	Chain Function Process Component D, B, A, C 3-deoxy-manno-octulosonate-8...
Primary reference	From structure to function: YrbI from Haemophilus influenzae (HI1679) is a phosphatase., Parsons JF, Lim K, Tempczyk A, Krajewski W, Eisenstein E, Herzberg O, Proteins 2002 Mar 1;46(4):393-404. PMID:11835514

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk] Biological Unit Coordinates (1j8d.pdb1.gz) 114 Kb LPC: Ligand-Protein Contacts for 1J8D CSU: Contacts of Structural Units for 1J8D Likely Quarternary Molecular Structure file(s) for 1J8D Structure Factors (227 Kb) Retrieve 1J8D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1J8D from S2C, [Save to disk] Re-refined 1j8d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1J8D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1j8d] [1j8d_A] [1j8d_B] [1j8d_C] [1j8d_D] SWISS-PROT database: [P45314]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---