1JC0 Luminescent Protein date Jun 07, 2001
title Crystal Structure Analysis Of A Redox-Sensitive Green Fluorescent Protein Variant In A Reduced Form
authors G.T.Hanson, R.Aggeler, D.Oglesbee, M.Cannon, R.A.Capaldi, R.Y.Tsien, S.J.Remington
compound source
Molecule: Green Fluorescent Protein
Chain: A, B, C
Synonym: Redox Sensitive Green Fluorescent Protein, Rosgfp2;
Engineered: Yes
Mutation: Yes
Organism_scientific: Aequorea Victoria
Organism_taxid: 6100
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prsetb
symmetry Space Group: P 21 21 2
R_factor 0.223 R_Free NULL
length a length b length c angle alpha angle beta angle gamma
185.630 67.862 56.376 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CRO enzyme
related structures by homologous chain: 1BFP, 1QXT
A, C, B

Primary referenceInvestigating mitochondrial redox potential with redox-sensitive green fluorescent protein indicators., Hanson GT, Aggeler R, Oglesbee D, Cannon M, Capaldi RA, Tsien RY, Remington SJ, J Biol Chem 2004 Mar 26;279(13):13044-53. Epub 2004 Jan 13. PMID:14722062
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk]
  • Biological Unit Coordinates (1jc0.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (1jc0.pdb2.gz) 38 Kb
  • Biological Unit Coordinates (1jc0.pdb3.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 1JC0
  • CSU: Contacts of Structural Units for 1JC0
  • Likely Quarternary Molecular Structure file(s) for 1JC0
  • Structure Factors (265 Kb)
  • Retrieve 1JC0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JC0 from S2C, [Save to disk]
  • Re-refined 1jc0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1JC0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JC0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1JC0, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jc0a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1jc0b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1jc0c_, region C [Jmol] [rasmolscript] [script source]
  • Fold representative 1jc0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jc0_C] [1jc0_A] [1jc0] [1jc0_B]
  • SWISS-PROT database: [P42212]
  • Domain organization of [GFP_AEQVI] by SWISSPFAM
  • Other resources with information on 1JC0
  • Community annotation for 1JC0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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