1K18 Transferase date Sep 24, 2001
title Minimized Average Nmr Structure Of The Zinc Finger Domain Of Human Dna Polymerase-Alpha
authors F.Evanics, L.Maurmann, W.W.Yang, R.N.Bose
compound source
Molecule: Dna Polymerase Alpha Catalytic Subunit
Chain: A
Fragment: Zinc Finger Domain (Residues 1347-1377)
Ec: 2.7.7.7
Engineered: Yes
Synthetic: Yes
Other_details: The Sequence Occurs Naturally In Humans.
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.7.7 BRENDA
related structures by homologous chain: 1K0P
Primary referenceNuclear magnetic resonance structures of the zinc finger domain of human DNA polymerase-alpha., Evanics F, Maurmann L, Yang WW, Bose RN, Biochim Biophys Acta 2003 Sep 23;1651(1-2):163-71. PMID:14499601
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1K18
  • Original NMR restraints for 1K18 from PDB
  • Retrieve 1K18 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1K18 from S2C, [Save to disk]
  • View 1K18 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1K18
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1K18, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1k18a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1k18 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1k18_A] [1k18]
  • SWISS-PROT database: [P09884]
  • Domain organization of [DPOLA_HUMAN] by SWISSPFAM
  • Other resources with information on 1K18
  • Community annotation for 1K18 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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