1K88 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
note 1K88 (Molecule of the Month:pdb56)
related structures by homologous chain: 1I3O, 1K86, 1SHJ
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of a procaspase-7 zymogen: mechanisms of activation and substrate binding., Chai J, Wu Q, Shiozaki E, Srinivasula SM, Alnemri ES, Shi Y, Cell 2001 Nov 2;107(3):399-407. PMID:11701129
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (1k88.pdb1.gz) 75 Kb
  • CSU: Contacts of Structural Units for 1K88
  • Likely Quarternary Molecular Structure file(s) for 1K88
  • Retrieve 1K88 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1K88 from S2C, [Save to disk]
  • View 1K88 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1k88] [1k88_A] [1k88_B]
  • SWISS-PROT database: [P55210]
  • Domain found in 1K88: [CASc ] by SMART

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