1LPK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CBB enzyme
related structures by homologous chain: 1HCG, 1V3X
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceDesign and quantitative structure-activity relationship of 3-amidinobenzyl-1H-indole-2-carboxamides as potent, nonchiral, and selective inhibitors of blood coagulation factor Xa., Matter H, Defossa E, Heinelt U, Blohm PM, Schneider D, Muller A, Herok S, Schreuder H, Liesum A, Brachvogel V, Lonze P, Walser A, Al-Obeidi F, Wildgoose P, J Med Chem 2002 Jun 20;45(13):2749-69. PMID:12061878
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (1lpk.pdb1.gz) 11 Kb
  • Biological Unit Coordinates (1lpk.pdb2.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 1LPK
  • CSU: Contacts of Structural Units for 1LPK
  • Likely Quarternary Molecular Structure file(s) for 1LPK
  • Structure Factors (138 Kb)
  • Retrieve 1LPK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LPK from S2C, [Save to disk]
  • Re-refined 1lpk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1LPK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lpk] [1lpk_A] [1lpk_B]
  • SWISS-PROT database: [P00742]
  • Domains found in 1LPK: [EGF_CA] [EGF_like] [GLA] [Tryp_SPc ] by SMART

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