1NAK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1F90, 1TPX
Primary referenceRecurring conformation of the human immunodeficiency virus type 1 gp120 V3 loop., Stanfield RL, Ghiara JB, Ollmann Saphire E, Profy AT, Wilson IA, Virology 2003 Oct 10;315(1):159-73. PMID:14592768
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (1nak.pdb1.gz) 70 Kb
  • Biological Unit Coordinates (1nak.pdb2.gz) 70 Kb
  • CSU: Contacts of Structural Units for 1NAK
  • Likely Quarternary Molecular Structure file(s) for 1NAK
  • Structure Factors (447 Kb)
  • Retrieve 1NAK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NAK from S2C, [Save to disk]
  • Re-refined 1nak structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1NAK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1nak] [1nak_H] [1nak_I] [1nak_L] [1nak_M] [1nak_P] [1nak_Q]
  • SWISS-PROT database: [P05877]
  • Domains found in 1NAK: [IG_like] [IGv ] by SMART

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