1NDD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, SO4 enzyme
related structures by homologous chain: 1BT0
Gene
Ontology
ChainFunctionProcessComponent
B, A, C, D


Primary referenceCrystal structure of the human ubiquitin-like protein NEDD8 and interactions with ubiquitin pathway enzymes., Whitby FG, Xia G, Pickart CM, Hill CP, J Biol Chem 1998 Dec 25;273(52):34983-91. PMID:9857030
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (1ndd.pdb1.gz) 14 Kb
  • Biological Unit Coordinates (1ndd.pdb2.gz) 14 Kb
  • Biological Unit Coordinates (1ndd.pdb3.gz) 14 Kb
  • Biological Unit Coordinates (1ndd.pdb4.gz) 14 Kb
  • Biological Unit Coordinates (1ndd.pdb5.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 1NDD
  • CSU: Contacts of Structural Units for 1NDD
  • Likely Quarternary Molecular Structure file(s) for 1NDD
  • Structure Factors (534 Kb)
  • Retrieve 1NDD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NDD from S2C, [Save to disk]
  • Re-refined 1ndd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1NDD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ndd] [1ndd_A] [1ndd_B] [1ndd_C] [1ndd_D]
  • SWISS-PROT database: [Q15843]
  • Domain found in 1NDD: [UBQ ] by SMART

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