1NDG		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ACY	enzyme
related structures	by homologous chain: 1LJG, 1R3J, 1UA6, 1YEI, 2LYO
Gene Ontology	Chain Function Process Component A C
Primary reference	X-ray snapshots of the maturation of an antibody response to a protein antigen., Li Y, Li H, Yang F, Smith-Gill SJ, Mariuzza RA, Nat Struct Biol 2003 Jun;10(6):482-8. PMID:12740607

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk] Biological Unit Coordinates (1ndg.pdb1.gz) 95 Kb LPC: Ligand-Protein Contacts for 1NDG CSU: Contacts of Structural Units for 1NDG Likely Quarternary Molecular Structure file(s) for 1NDG Structure Factors (366 Kb) Retrieve 1NDG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1NDG from S2C, [Save to disk] Re-refined 1ndg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1NDG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ndg] [1ndg_A] [1ndg_B] [1ndg_C] SWISS-PROT database: [P01865] [P01837] [P00698] Domains found in 1NDG: [IG_like] [IGv] [LYZ1 ] by SMART

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