1NDM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1NC2, 1SY6, 1XEJ, 1YEK, 2LZ2
Gene
Ontology
ChainFunctionProcessComponent
A


C


Primary referenceX-ray snapshots of the maturation of an antibody response to a protein antigen., Li Y, Li H, Yang F, Smith-Gill SJ, Mariuzza RA, Nat Struct Biol 2003 Jun;10(6):482-8. PMID:12740607
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (1ndm.pdb1.gz) 97 Kb
  • CSU: Contacts of Structural Units for 1NDM
  • Likely Quarternary Molecular Structure file(s) for 1NDM
  • Structure Factors (241 Kb)
  • Retrieve 1NDM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NDM from S2C, [Save to disk]
  • Re-refined 1ndm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1NDM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ndm_C] [1ndm] [1ndm_A] [1ndm_B]
  • SWISS-PROT database: [P01865] [P01837] [P00698]
  • Domains found in 1NDM: [IG_like] [IGv] [LYZ1 ] by SMART

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