1NUN Hormone Growth Factor Membrane Protein date Jan 31, 2003
title Crystal Structure Analysis Of The Fgf10-Fgfr2b Complex
authors B.K.Yeh, M.Igarashi, A.V.Eliseenkova, A.N.Plotnikov, I.Sher, D.Ron, S.A.Aaronson, M.Mohammadi
compound source
Molecule: Fibroblast Growth Factor-10
Chain: A
Synonym: Fgf-10, Keratinocyte Growth Factor Receptor, K- Sam Protein, Protein Tyrosine Kinase, Receptor Like 14, Fgf Receptor, Bacteria-Expressed Kinase, Fibroblast Growth Factor Receptor Bek, Tyrosylprotein Kinase, Hydroxyaryl- Protein Kinase;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fgf10
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-9c

Molecule: Fibroblast Growth Factor Receptor 2 Isoform 2
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28a
symmetry Space Group: P 64 2 2
R_factor 0.239 R_Free 0.288
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.930 113.930 164.852 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.90 Å
ligand 15P, MSE, SO4 enzyme
related structures by homologous chain: 1E0O, 1FQ9
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis by which alternative splicing confers specificity in fibroblast growth factor receptors., Yeh BK, Igarashi M, Eliseenkova AV, Plotnikov AN, Sher I, Ron D, Aaronson SA, Mohammadi M, Proc Natl Acad Sci U S A 2003 Mar 4;100(5):2266-71. PMID:12591959
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (1nun.pdb1.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 1NUN
  • CSU: Contacts of Structural Units for 1NUN
  • Likely Quarternary Molecular Structure file(s) for 1NUN
  • Retrieve 1NUN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NUN from S2C, [Save to disk]
  • View 1NUN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1NUN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1NUN, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1nuna_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1nunb1, region B:151-250 [Jmol] [rasmolscript] [script source]
        - Domain d1nunb2, region B:251-359 [Jmol] [rasmolscript] [script source]
  • Fold representative 1nun from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1nun_B] [1nun_A] [1nun]
  • SWISS-PROT database: [O15520] [P21802]
  • Domain organization of [FGF10_HUMAN] [FGFR2_HUMAN] by SWISSPFAM
  • Domains found in 1NUN: [FGF] [IGc2 ] by SMART
  • Other resources with information on 1NUN
  • Community annotation for 1NUN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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