1O0A date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 2 Modelsresolution
ligand LI1, RET, SQU enzyme
related structures by homologous chain: 1C3W, 1P8U
Gene
Ontology
ChainFunctionProcessComponent
A
  • ion channel activity


  • Primary referenceMechanism of proton transport in bacteriorhodopsin from crystallographic structures of the K, L, M1, M2, and M2' intermediates of the photocycle., Lanyi JK, Schobert B, J Mol Biol 2003 Apr 25;328(2):439-50. PMID:12691752
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (1o0a.pdb1.gz) 123 Kb
  • LPC: Ligand-Protein Contacts for 1O0A
  • CSU: Contacts of Structural Units for 1O0A
  • Retrieve 1O0A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1O0A from S2C, [Save to disk]
  • View 1O0A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1o0a] [1o0a_A]
  • SWISS-PROT database: [P02945]
  • Belongs to the ion-translocating microbial rhodopsin (mr) family according to TCDB.
  • Domain found in 1O0A: [Bac_rhodopsin ] by SMART

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