1OE9 Atpase Myosin date Mar 21, 2003
title Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free
authors P.D.Coureux, A.L.Wells, J.Menetrey, C.M.Yengo, C.A.Morris, H.L.Sweeney, A.Houdusse
compound source
Molecule: Myosin Va
Chain: A
Fragment: Motor Domain, Residues 1-792
Synonym: Myosin 5a, Dilute Myosin Heavy Chain, Non-Muscle, Myosin Heavy Chain P190, Myosin-V;
Engineered: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus

Molecule: Myosin Light Chain 1, Slow-Twitch Muscle A Isoform;
Chain: B
Fragment: Residues 59-208
Synonym: Mlc1sa
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.220 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.933 98.247 111.378 90.00 101.43 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand SO4 enzyme
related structures by homologous chain: 1W7I, 1W7J, 1W8J
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceA structural state of the myosin V motor without bound nucleotide., Coureux PD, Wells AL, Menetrey J, Yengo CM, Morris CA, Sweeney HL, Houdusse A, Nature 2003 Sep 25;425(6956):419-23. PMID:14508494
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk]
  • Biological Unit Coordinates (1oe9.pdb1.gz) 147 Kb
  • LPC: Ligand-Protein Contacts for 1OE9
  • CSU: Contacts of Structural Units for 1OE9
  • Likely Quarternary Molecular Structure file(s) for 1OE9
  • Structure Factors (1043 Kb)
  • Retrieve 1OE9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OE9 from S2C, [Save to disk]
  • Re-refined 1oe9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OE9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OE9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1OE9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1oe9a1, region A:5-62 [Jmol] [rasmolscript] [script source]
        - Domain d1oe9a2, region A:63-795 [Jmol] [rasmolscript] [script source]
        - Domain d1oe9b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1oe9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oe9_A] [1oe9_B] [1oe9]
  • SWISS-PROT database: [P14649] [Q02440]
  • Domain organization of [MYL6B_HUMAN] [MYO5A_CHICK] by SWISSPFAM
  • Domains found in 1OE9: [EFh] [IQ] [MYSc ] by SMART
  • Other resources with information on 1OE9
  • Community annotation for 1OE9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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