1OGU	Transferase	date	May 13, 2003
title	Structure Of Human Thr160-Phospho Cdk2cyclin A Complexed Wi Arylamino-4-Cyclohexylmethyl-5-Nitroso-6-Aminopyrimidine In
authors	D.J.Pratt, J.A.Endicott, M.E.M.Noble
compound		source
Molecule: Cell Division Protein Kinase 2 Chain: A, C Synonym: P33 Protein Kinase Ec: 2.7.1.37 Engineered: Yes Other_details: Phosphorylated On Thr160		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Cyclin A2 Chain: B, D Fragment: Residues 174-432 Synonym: Cyclin A, Cyclin A3 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.198 R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma 73.836 133.676 148.335 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	SGM, ST8, TPO BindingDB	enzyme	Transferase E.C.2.7.1.37 BRENDA
related structures	by homologous chain: 1GY3, 1H4L, 1JST, 2BHH
Gene Ontology	Chain Function Process Component A, C
Primary reference	Structure-based design of 2-arylamino-4-cyclohexylmethyl-5-nitroso-6-aminopyrimidine inhibitors of cyclin-dependent kinases 1 and 2., Sayle KL, Bentley J, Boyle FT, Calvert AH, Cheng Y, Curtin NJ, Endicott JA, Golding BT, Hardcastle IR, Jewsbury P, Mesguiche V, Newell DR, Noble ME, Parsons RJ, Pratt DJ, Wang LZ, Griffin RJ, Bioorg Med Chem Lett 2003 Sep 15;13(18):3079-82. PMID:12941338

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (183 Kb) [Save to disk] Biological Unit Coordinates (1ogu.pdb1.gz) 92 Kb Biological Unit Coordinates (1ogu.pdb2.gz) 87 Kb LPC: Ligand-Protein Contacts for 1OGU CSU: Contacts of Structural Units for 1OGU Likely Quarternary Molecular Structure file(s) for 1OGU Structure Factors (329 Kb) Retrieve 1OGU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OGU from S2C, [Save to disk] Re-refined 1ogu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OGU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1OGU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1OGU, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ogua_, region A [Jmol] [rasmolscript] [script source]     - Domain d1ogub1, region B:178-309 [Jmol] [rasmolscript] [script source]     - Domain d1ogub2, region B:310-432 [Jmol] [rasmolscript] [script source]     - Domain d1oguc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1ogud1, region D:178-309 [Jmol] [rasmolscript] [script source]     - Domain d1ogud2, region D:310-432 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ogu_B] [1ogu_A] [1ogu] [1ogu_D] [1ogu_C] SWISS-PROT database: [P20248] [P24941] Domain organization of [CCNA2_HUMAN] [CDK2_HUMAN] by SWISSPFAM Domains found in 1OGU: [CYCLIN] [Cyclin_C] [S_TKc ] by SMART

Other resources with information on 1OGU

Community annotation for 1OGU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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