1OPD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
note 1OPD is a representative structure
related structures by homologous chain: 1CM3
Gene
Ontology
ChainFunctionProcessComponent
A
  • enzyme activator activity


  • Primary referenceMutation of serine-46 to aspartate in the histidine-containing protein of Escherichia coli mimics the inactivation by phosphorylation of serine-46 in HPrs from gram-positive bacteria., Napper S, Anderson JW, Georges F, Quail JW, Delbaere LT, Waygood EB, Biochemistry 1996 Sep 3;35(35):11260-7. PMID:8784179
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (18 Kb) [Save to disk]
  • Biological Unit Coordinates (1opd.pdb1.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 1OPD
  • CSU: Contacts of Structural Units for 1OPD
  • Likely Quarternary Molecular Structure file(s) for 1OPD
  • Structure Factors (104 Kb)
  • Retrieve 1OPD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OPD from S2C, [Save to disk]
  • Re-refined 1opd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OPD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1opd] [1opd_A]
  • SWISS-PROT database: [P0AA04]
  • Belongs to the phosphotransferase system hpr (hpr) family according to TCDB.

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