1OQD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
related structures	by homologous chain: 1KD7, 1OQE, 1XU2
Gene Ontology	Chain Function Process Component J, A, C, F, E, B, D, H, I, G K, O, P, Q, M, N, R, L
Primary reference	Ligand-receptor binding revealed by the TNF family member TALL-1., Liu Y, Hong X, Kappler J, Jiang L, Zhang R, Xu L, Pan CH, Martin WE, Murphy RC, Shu HB, Dai S, Zhang G, Nature 2003 May 1;423(6935):49-56. PMID:12721620

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (278 Kb) [Save to disk] Biological Unit Coordinates (1oqd.pdb1.gz) 1614 Kb CSU: Contacts of Structural Units for 1OQD Likely Quarternary Molecular Structure file(s) for 1OQD Structure Factors (637 Kb) Retrieve 1OQD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OQD from S2C, [Save to disk] Re-refined 1oqd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OQD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1oqd] [1oqd_A] [1oqd_B] [1oqd_C] [1oqd_D] [1oqd_E] [1oqd_F] [1oqd_G] [1oqd_H] [1oqd_I] [1oqd_J] [1oqd_K] [1oqd_L] [1oqd_M] [1oqd_N] [1oqd_O] [1oqd_P] [1oqd_Q] [1oqd_R] SWISS-PROT database: [Q9Y275] [Q02223] Domain found in 1OQD: [TNF ] by SMART

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