1OW6 Transferase date Mar 28, 2003
title Paxillin Ld4 Motif Bound To The Focal Adhesion Targeting (Fa Of The Focal Adhesion Kinase
authors M.K.Hoellerer, M.E.M.Noble, G.Labesse, I.D.Campbell, J.M.Werner,
compound source
Molecule: Focal Adhesion Kinase 1
Chain: A, B, C
Fragment: Focal Adhesion Targeting Domain
Synonym: Fadk 1, Pp125fak, Protein- Tyrosine Kinase 2
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptk2 Or Fak1 Or Fak
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p2

Molecule: Paxillin
Chain: D, F
Fragment: Paxillin Ld4 Motif
Engineered: Yes

Synthetic: Yes
Other_details: Sequence Derived From Human Paxillin
symmetry Space Group: C 2 2 21
R_factor 0.242 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.308 223.274 96.992 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.35 Å
ligand
enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1K40, 1OW7
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceMolecular recognition of paxillin LD motifs by the focal adhesion targeting domain., Hoellerer MK, Noble ME, Labesse G, Campbell ID, Werner JM, Arold ST, Structure (Camb) 2003 Oct;11(10):1207-17. PMID:14527389
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (1ow6.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (1ow6.pdb2.gz) 45 Kb
  • Biological Unit Coordinates (1ow6.pdb3.gz) 49 Kb
  • CSU: Contacts of Structural Units for 1OW6
  • Likely Quarternary Molecular Structure file(s) for 1OW6
  • Structure Factors (289 Kb)
  • Retrieve 1OW6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OW6 from S2C, [Save to disk]
  • Re-refined 1ow6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OW6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OW6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1OW6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ow6a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ow6b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1ow6c_, region C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ow6_D] [1ow6] [1ow6_A] [1ow6_C] [1ow6_F] [1ow6_B]
  • SWISS-PROT database: [Q05397]
  • Domain organization of [FAK1_HUMAN] by SWISSPFAM
  • Other resources with information on 1OW6
  • Community annotation for 1OW6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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