1PDF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
J, N, L, A, O, K, P, C, G, F, B, Q, R, M, D, I, H, E


Primary referenceThree-dimensional structure of bacteriophage T4 baseplate., Kostyuchenko VA, Leiman PG, Chipman PR, Kanamaru S, van Raaij MJ, Arisaka F, Mesyanzhinov VV, Rossmann MG, Nat Struct Biol 2003 Sep;10(9):688-93. Epub 2003 Aug 17. PMID:12923574
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (1pdf.pdb1.gz) 80 Kb
  • CSU: Contacts of Structural Units for 1PDF
  • Likely Quarternary Molecular Structure file(s) for 1PDF
  • Retrieve 1PDF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PDF from S2C, [Save to disk]
  • View 1PDF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pdf] [1pdf_A] [1pdf_B] [1pdf_C] [1pdf_D] [1pdf_E] [1pdf_F] [1pdf_G] [1pdf_H] [1pdf_I] [1pdf_J] [1pdf_K] [1pdf_L] [1pdf_M] [1pdf_N] [1pdf_O] [1pdf_P] [1pdf_Q] [1pdf_R]
  • SWISS-PROT database: [P10929]
  • Belongs to the gp27/5 t4-baseplate (t4-bp) family according to TCDB.

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