1PDQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand M3L enzyme
related structures by homologous chain: 1PFB
Primary referenceMolecular basis for the discrimination of repressive methyl-lysine marks in histone H3 by Polycomb and HP1 chromodomains., Fischle W, Wang Y, Jacobs SA, Kim Y, Allis CD, Khorasanizadeh S, Genes Dev 2003 Aug 1;17(15):1870-81. PMID:12897054
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (1pdq.pdb1.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 1PDQ
  • CSU: Contacts of Structural Units for 1PDQ
  • Likely Quarternary Molecular Structure file(s) for 1PDQ
  • Structure Factors (84 Kb)
  • Retrieve 1PDQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PDQ from S2C, [Save to disk]
  • Re-refined 1pdq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1PDQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pdq_B] [1pdq] [1pdq_A]
  • SWISS-PROT database: [P26017]
  • Domain found in 1PDQ: [CHROMO ] by SMART

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