1PDR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1BFE, 1UM7
Primary referenceCrystal structure of a PDZ domain., Morais Cabral JH, Petosa C, Sutcliffe MJ, Raza S, Byron O, Poy F, Marfatia SM, Chishti AH, Liddington RC, Nature 1996 Aug 15;382(6592):649-52. PMID:8757139
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (1pdr.pdb1.gz) 101 Kb
  • CSU: Contacts of Structural Units for 1PDR
  • Likely Quarternary Molecular Structure file(s) for 1PDR
  • Structure Factors (54 Kb)
  • Retrieve 1PDR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PDR from S2C, [Save to disk]
  • Re-refined 1pdr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1PDR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pdr] [1pdr_A]
  • SWISS-PROT database: [Q12959]
  • Belongs to the ezrin/radixin/moesin-binding phosphoprotein 50 (ebp50) family according to TCDB.
  • Domain found in 1PDR: [PDZ ] by SMART

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