1PWA Hormone Growth Factor date Jul 01, 2003
title Crystal Structure Of Fibroblast Growth Factor 19
authors N.J.Harmer, L.Pellegrini, D.Chirgadze, J.Fernandez-Recio, T.L.Bl
compound source
Molecule: Fibroblast Growth Factor-19
Chain: A
Synonym: Fgf-19
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fgf19
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Rosetta
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgat2
symmetry Space Group: H 3 2
R_factor 0.180 R_Free 0.195
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.573 67.573 193.374 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.30 Å
ligand GOL, SO4, TRS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe crystal structure of fibroblast growth factor (FGF) 19 reveals novel features of the FGF family and offers a structural basis for its unusual receptor affinity., Harmer NJ, Pellegrini L, Chirgadze D, Fernandez-Recio J, Blundell TL, Biochemistry 2004 Jan 27;43(3):629-40. PMID:14730967
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1pwa.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 1PWA
  • CSU: Contacts of Structural Units for 1PWA
  • Likely Quarternary Molecular Structure file(s) for 1PWA
  • Structure Factors (565 Kb)
  • Retrieve 1PWA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PWA from S2C, [Save to disk]
  • Re-refined 1pwa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1PWA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1PWA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1PWA from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1PWA, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1pwaa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1pwa from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pwa_A] [1pwa]
  • SWISS-PROT database: [O95750]
  • Domain organization of [FGF19_HUMAN] by SWISSPFAM
  • Domain found in 1PWA: [FGF ] by SMART
  • Other resources with information on 1PWA
  • Community annotation for 1PWA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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