1QIW Calcium-Binding Protein date Jun 17, 1999
title Calmodulin Complexed With N-(3,3,-Diphenylpropyl)-N'-[1-R-(3 Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
authors V.Harmat, Z.S.Bocskei, B.G.Vertessy, J.Ovadi, G.Naray-Szabo
compound source
Molecule: Calmodulin
Chain: A, B
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Brain
Cellular_location: Cytoplasm
symmetry Space Group: P 1
R_factor 0.232 R_Free 0.317
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.960 56.200 35.270 99.52 114.47 96.86
method X-Ray Diffractionresolution 2.30 Å
ligand CA, DPD BindingDB enzyme
related structures by homologous chain: 1CDL, 1L7Z
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • enzyme regulator activity


  • Primary referenceA new potent calmodulin antagonist with arylalkylamine structure: crystallographic, spectroscopic and functional studies., Harmat V, Bocskei Z, Naray-Szabo G, Bata I, Csutor AS, Hermecz I, Aranyi P, Szabo B, Liliom K, Vertessy BG, Ovadi J, J Mol Biol 2000 Mar 31;297(3):747-55. PMID:10731425
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (1qiw.pdb1.gz) 24 Kb
  • Biological Unit Coordinates (1qiw.pdb2.gz) 24 Kb
  • LPC: Ligand-Protein Contacts for 1QIW
  • CSU: Contacts of Structural Units for 1QIW
  • Likely Quarternary Molecular Structure file(s) for 1QIW
  • Structure Factors (75 Kb)
  • Retrieve 1QIW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QIW from S2C, [Save to disk]
  • Re-refined 1qiw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1QIW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1QIW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1QIW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qiwa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1qiwb_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1qiw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qiw] [1qiw_B] [1qiw_A]
  • SWISS-PROT database: [P62157]
  • Domain organization of [CALM_BOVIN] by SWISSPFAM
  • Domain found in 1QIW: [EFh ] by SMART
  • Other resources with information on 1QIW
  • Community annotation for 1QIW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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