OCA Atlas for 1QYZ

1QYZ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

HCO

enzyme

related structures

by homologous chain: 1C52, 1R0Q

Gene
Ontology

Chain	Function	Process	Component
A	electron transfer activity

Primary reference

Cytochrome rC552, formed during expression of the truncated, Thermus thermophilus cytochrome c552 gene in the cytoplasm of Escherichia coli, reacts spontaneously to form protein-bound 2-formyl-4-vinyl (Spirographis) heme., Fee JA, Todaro TR, Luna E, Sanders D, Hunsicker-Wang LM, Patel KM, Bren KL, Gomez-Moran E, Hill MG, Ai J, Loehr TM, Oertling WA, Williams PA, Stout CD, McRee D, Pastuszyn A, Biochemistry. 2004 Sep 28;43(38):12162-76. PMID:15379555

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]

Biological Unit Coordinates (1qyz.pdb1.gz) 47 Kb

LPC: Ligand-Protein Contacts for 1QYZ

CSU: Contacts of Structural Units for 1QYZ

Likely Quarternary Molecular Structure file(s) for 1QYZ

Structure Factors (277 Kb)

Retrieve 1QYZ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1QYZ from S2C, [Save to disk]

Re-refined 1qyz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1QYZ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1qyz] [1qyz_A]

SWISS-PROT database: [P04164]

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