1RGD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 11 Modelsresolution
ligand ZN enzyme
related structures by homologous chain: 1R4R, 2GDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure refinement of the glucocorticoid receptor-DNA binding domain from NMR data by relaxation matrix calculations., van Tilborg MA, Bonvin AM, Hard K, Davis AL, Maler B, Boelens R, Yamamoto KR, Kaptein R, J Mol Biol 1995 Apr 7;247(4):689-700. PMID:7723024
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (1rgd.pdb1.gz) 9 Kb
  • LPC: Ligand-Protein Contacts for 1RGD
  • CSU: Contacts of Structural Units for 1RGD
  • Retrieve 1RGD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RGD from S2C, [Save to disk]
  • View 1RGD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rgd] [1rgd_A]
  • SWISS-PROT database: [P06536]
  • Domain found in 1RGD: [ZnF_C4 ] by SMART

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