1RY3 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 20 Modelsresolution
related structures by homologous chain: 1CW5
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR solution structure of the precursor for carnobacteriocin B2, an antimicrobial peptide from Carnobacterium piscicola., Sprules T, Kawulka KE, Gibbs AC, Wishart DS, Vederas JC, Eur J Biochem 2004 May;271(9):1748-56. PMID:15096213
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (309 Kb) [Save to disk]
  • Biological Unit Coordinates (1ry3.pdb1.gz) 16 Kb
  • CSU: Contacts of Structural Units for 1RY3
  • Original NMR restraints for 1RY3 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1RY3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RY3 from S2C, [Save to disk]
  • View 1RY3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ry3] [1ry3_A]
  • SWISS-PROT database: [P38580]
  • Belongs to the pediocin (pediocin) family according to TCDB.

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