OCA Atlas for 1S9F

1S9F

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CA, DDY, MG

enzyme

related structures

by homologous chain: 1JX4, 1RYS

Gene
Ontology

Chain	Function	Process	Component
B, D, A, C

Primary reference

Dpo4 is hindered in extending a G.T mismatch by a reverse wobble., Trincao J, Johnson RE, Wolfle WT, Escalante CR, Prakash S, Prakash L, Aggarwal AK, Nat Struct Mol Biol 2004 May;11(5):457-62. Epub 2004 Apr 11. PMID:15077104

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (294 Kb) [Save to disk]

Biological Unit Coordinates (1s9f.pdb1.gz) 75 Kb

Biological Unit Coordinates (1s9f.pdb2.gz) 75 Kb

Biological Unit Coordinates (1s9f.pdb3.gz) 75 Kb

Biological Unit Coordinates (1s9f.pdb4.gz) 76 Kb

LPC: Ligand-Protein Contacts for 1S9F

CSU: Contacts of Structural Units for 1S9F

Likely Quarternary Molecular Structure file(s) for 1S9F

Structure Factors (1105 Kb)

Retrieve 1S9F in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1S9F from S2C, [Save to disk]

Re-refined 1s9f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1S9F in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1s9f_K] [1s9f_L] [1s9f] [1s9f_A] [1s9f_B] [1s9f_C] [1s9f_D] [1s9f_E] [1s9f_F] [1s9f_G] [1s9f_H] [1s9f_I] [1s9f_J]

SWISS-PROT database: [Q97W02]

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