1SDD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CU, NAG enzyme
note 1SDD is a representative structure
related structures by homologous chain: 1CZV
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceThe crystal structure of activated protein C-inactivated bovine factor Va: Implications for cofactor function., Adams TE, Hockin MF, Mann KG, Everse SJ, Proc Natl Acad Sci U S A 2004 Jun 15;101(24):8918-23. Epub 2004 Jun 7. PMID:15184653
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk]
  • Biological Unit Coordinates (1sdd.pdb1.gz) 146 Kb
  • LPC: Ligand-Protein Contacts for 1SDD
  • CSU: Contacts of Structural Units for 1SDD
  • Likely Quarternary Molecular Structure file(s) for 1SDD
  • Structure Factors (213 Kb)
  • Retrieve 1SDD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SDD from S2C, [Save to disk]
  • Re-refined 1sdd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1SDD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sdd] [1sdd_A] [1sdd_B]
  • SWISS-PROT database: [Q28107]
  • Domain found in 1SDD: [FA58C ] by SMART

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