1SKM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand HCX, SAH enzyme
related structures by homologous chain: 1FJX, 6MHT
Gene
Ontology
ChainFunctionProcessComponent
A
  • DNA (cytosine-5-)-methyltran...


  • Primary referenceCaught in the act: visualization of an intermediate in the DNA base-flipping pathway induced by HhaI methyltransferase., Horton JR, Ratner G, Banavali NK, Huang N, Choi Y, Maier MA, Marquez VE, MacKerell AD Jr, Cheng X, Nucleic Acids Res 2004 Jul 23;32(13):3877-86. Print 2004. PMID:15273274
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (1skm.pdb1.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 1SKM
  • CSU: Contacts of Structural Units for 1SKM
  • Likely Quarternary Molecular Structure file(s) for 1SKM
  • Retrieve 1SKM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SKM from S2C, [Save to disk]
  • View 1SKM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1skm] [1skm_A] [1skm_C] [1skm_D]
  • SWISS-PROT database: [P05102]

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