OCA Atlas for 1T25

1T25

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

GAG, GOL, NAI BindingDB

enzyme

note

1T25 (Molecule of the Month:pdb102)

related structures

by homologous chain: 1T2E, 1U4S

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

Identification and activity of a series of azole-based compounds with lactate dehydrogenase-directed anti-malarial activity., Cameron A, Read JA, Tranter R, Winter VJ, Sessions RB, Brady RL, Vivas L, Easton A, Kendrick H, Croft SL, Barros D, Lavandera JL, Martin JJ, Risco F, Garcia-Ochoa S, Gamo FJ, Sanz L, Leon L, Ruiz JR, Gabarro R, Mallo A, Gomez De Las Heras F, J Biol Chem 2004 Apr 26;. PMID:15117937

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]

Biological Unit Coordinates (1t25.pdb1.gz) 209 Kb

LPC: Ligand-Protein Contacts for 1T25

CSU: Contacts of Structural Units for 1T25

Likely Quarternary Molecular Structure file(s) for 1T25

Structure Factors (231 Kb)

Retrieve 1T25 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1T25 from S2C, [Save to disk]

Re-refined 1t25 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1T25 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1t25] [1t25_A]

SWISS-PROT database: [Q27743]

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