1T7F Hormone Growth Factor Receptor date May 10, 2004
title Crystal Structure Of The Androgen Receptor Ligand Binding Domain In Complex With A Lxxll Motif
authors E.Hur, S.J.Pfaff, E.S.Payne, H.Gron, B.M.Buehrer, R.J.Fletterick
compound source
Molecule: Androgen Receptor
Chain: A
Fragment: Ligand Binding Domain
Synonym: Dihydrotestosterone Receptor
Engineered: Yes
Organism_scientific: Pan Troglodytes
Organism_common: Chimpanzee
Organism_taxid: 9598
Gene: Ar, Nr3c4
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Lxxll Motif Peptide
Chain: B
Engineered: Yes

Synthetic: Yes
Other_details: Derived From Phage Display Selections
symmetry Space Group: P 21 21 21
R_factor 0.199 R_Free 0.218
length a length b length c angle alpha angle beta angle gamma
54.225 66.327 69.407 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand DHT BindingDB enzyme
related structures by homologous chain: 1T65, 1T7M
Primary referenceRecognition and Accommodation at the Androgen Receptor Coactivator Binding Interface., Hur E, Pfaff SJ, Payne ES, Gron H, Buehrer BM, Fletterick RJ, PLoS Biol 2004 Aug 24;2(9):E274. PMID:15328534
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (1t7f.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 1T7F
  • CSU: Contacts of Structural Units for 1T7F
  • Likely Quarternary Molecular Structure file(s) for 1T7F
  • Structure Factors (250 Kb)
  • Retrieve 1T7F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1T7F from S2C, [Save to disk]
  • Re-refined 1t7f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1T7F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1T7F
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1T7F, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1t7fa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1t7f from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1t7f_A] [1t7f] [1t7f_B]
  • SWISS-PROT database: [O97775]
  • Domain organization of [ANDR_PANTR] by SWISSPFAM
  • Domain found in 1T7F: [HOLI ] by SMART
  • Other resources with information on 1T7F
  • Community annotation for 1T7F at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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