OCA Atlas for 1TVH

1TVH

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

GOL

enzyme

related structures

by homologous chain: 1FZO, 1LDS, 1TVB

Gene
Ontology

Chain	Function	Process	Component
B, E		cellular response to iron io...

Primary reference

Increased Immunogenicity of an Anchor-Modified Tumor-Associated Antigen Is Due to the Enhanced Stability of the Peptide/MHC Complex: Implications for Vaccine Design., Borbulevych OY, Baxter TK, Yu Z, Restifo NP, Baker BM, J Immunol 2005 Apr 15;174(8):4812-20. PMID:15814707

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]

Biological Unit Coordinates (1tvh.pdb1.gz) 73 Kb

Biological Unit Coordinates (1tvh.pdb2.gz) 74 Kb

LPC: Ligand-Protein Contacts for 1TVH

CSU: Contacts of Structural Units for 1TVH

Likely Quarternary Molecular Structure file(s) for 1TVH

Structure Factors (995 Kb)

Retrieve 1TVH in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1TVH from S2C, [Save to disk]

Re-refined 1tvh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1TVH in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1tvh] [1tvh_A] [1tvh_B] [1tvh_C] [1tvh_D] [1tvh_E] [1tvh_F]

SWISS-PROT database: [P01892] [P61769] [P40967]

Domain found in 1TVH: [IGc1 ] by SMART

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