1U2H Contractile Protein date Jul 19, 2004
title X-Ray Structure Of The N-Terminally Truncated Human Apep-1
authors B.A.Manjasetty, C.Scheich, Y.Roske, F.H.Niesen, F.Gotz, K.Bussow, U.Heinemann
compound source
Molecule: Aortic Preferentially Expressed Protein 1
Chain: A
Fragment: Residues 15-113
Synonym: Apeg-1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Arotic Preferentially Expressed Gene 1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Scs1
Expression_system_vector_type: Plasmid
Expression_system_vector: Pqtev
Expression_system_plasmid: Prare
Other_details: Psf Clone Id 111408 And Rzpd Id Psfep250b117
symmetry Space Group: C 1 2 1
R_factor 0.161 R_Free 0.172
crystal
cell
length a length b length c angle alpha angle beta angle gamma
81.541 25.522 42.544 90.00 104.59 90.00
method X-Ray Diffractionresolution 0.96 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray structure of engineered human Aortic Preferentially Expressed Protein-1 (APEG-1)., Manjasetty BA, Niesen FH, Scheich C, Roske Y, Gotz F, Behlke J, Sievert V, Heinemann U, Bussow K, BMC Struct Biol. 2005 Dec 14;5(1):21. PMID:16354304
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (1u2h.pdb1.gz) 73 Kb
  • CSU: Contacts of Structural Units for 1U2H
  • Likely Quarternary Molecular Structure file(s) for 1U2H
  • Structure Factors (328 Kb)
  • Retrieve 1U2H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U2H from S2C, [Save to disk]
  • Re-refined 1u2h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1U2H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1U2H
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1U2H, from MSDmotif at EBI
  • Fold representative 1u2h from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u2h_A] [1u2h]
  • SWISS-PROT database: [Q15772]
  • Domain organization of [SPEG_HUMAN] by SWISSPFAM
  • Domain found in 1U2H: [IGc2 ] by SMART
  • Other resources with information on 1U2H
  • Community annotation for 1U2H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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