1U4A Protein Binding date Jul 23, 2004
title Solution Structure Of Human Sumo-3 C47s
authors H.Ding, Y.Xu, H.Dai, Y.Tang, J.Wu, Y.Shi
compound source
Molecule: Ubiquitin-Like Protein Smt3a
Chain: A
Fragment: Ubiquitin-Like Domain
Synonym: Small Ubiquitin-Like Modifier Protein 3
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Brain
Gene: Sumo3
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-22b(+)
methodSolution NMR
related structures by homologous chain: 1WM2
Primary referenceSolution Structure of Human SUMO-3 C47S and Its Binding Surface for Ubc9(,)., Ding H, Xu Y, Chen Q, Dai H, Tang Y, Wu J, Shi Y, Biochemistry 2005 Mar 1;44(8):2790-9. PMID:15723523
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (422 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1U4A
  • Original NMR restraints for 1U4A from PDB
  • Retrieve 1U4A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U4A from S2C, [Save to disk]
  • View 1U4A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1U4A
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1U4A, from MSDmotif at EBI
  • Fold representative 1u4a from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u4a] [1u4a_A]
  • SWISS-PROT database: [P55854]
  • Domain organization of [SUMO3_HUMAN] by SWISSPFAM
  • Domain found in 1U4A: [UBQ ] by SMART
  • Other resources with information on 1U4A
  • Community annotation for 1U4A at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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