1U59 Transferase date Jul 27, 2004
title Crystal Structure Of The Zap-70 Kinase Domain In Complex Wit Staurosporine
authors L.Jin, S.Pluskey, E.C.Petrella, S.M.Cantin, J.C.Gorga, M.J.Rynkie P.Pandey, J.E.Strickler, R.E.Babine, D.T.Weaver, K.J.Seidl
compound source
Molecule: Tyrosine-Protein Kinase Zap-70
Chain: A
Fragment: Kinase Domain
Synonym: 70 Kda Zeta-Associated Protein, Syk-Related Tyrosi
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zap70, Srk
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf+
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Ptriex And Bacvector
symmetry Space Group: P 21 21 21
R_factor 0.217 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.056 57.064 125.133 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand STU BindingDB enzyme Transferase E.C.2.7.1.112 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe three-dimensional structure of the ZAP-70 kinase domain in complex with staurosporine-implications for the design of selective inhibitors., Jin L, Pluskey S, Petrella EC, Cantin SM, Gorga JC, Rynkiewicz MJ, Pandey P, Strickler JE, Babine RE, Weaver DT, Seidl KJ, J Biol Chem 2004 Jul 29;. PMID:15292186
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (1u59.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 1U59
  • CSU: Contacts of Structural Units for 1U59
  • Likely Quarternary Molecular Structure file(s) for 1U59
  • Structure Factors (202 Kb)
  • Retrieve 1U59 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U59 from S2C, [Save to disk]
  • Re-refined 1u59 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1U59 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1U59
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1U59, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1u59a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1u59 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u59_A] [1u59]
  • SWISS-PROT database: [P43403]
  • Domain organization of [ZAP70_HUMAN] by SWISSPFAM
  • Domain found in 1U59: [TyrKc ] by SMART
  • Other resources with information on 1U59
  • Community annotation for 1U59 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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