1V13 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
related structures by homologous chain: 1BXI, 1MZ8
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure-based analysis of the metal-dependent mechanism of H-N-H endonucleases., Mate MJ, Kleanthous C, J Biol Chem. 2004 Aug 13;279(33):34763-9. Epub 2004 Jun 8. PMID:15190054
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (1v13.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 1V13
  • CSU: Contacts of Structural Units for 1V13
  • Likely Quarternary Molecular Structure file(s) for 1V13
  • Structure Factors (283 Kb)
  • Retrieve 1V13 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1V13 from S2C, [Save to disk]
  • Re-refined 1v13 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1V13 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1v13] [1v13_A] [1v13_B]
  • SWISS-PROT database: [P09883]
  • Belongs to the channel-forming colicin (colicin) family according to TCDB.
  • Domain found in 1V13: [HNHc ] by SMART

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