1VF5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
note 1VF5 (Molecule of the Month:pdb137)is a representative structure
related structures by homologous chain: 1CI3, 1RFS, 1TU2
Gene
Ontology
ChainFunctionProcessComponent
B, O


H, U
  • electron transfer activity
  • electron transporter, transf...


    • N, A


    P, C
  • electron transfer activity


    • Q, D
  • electron transporter, transf...


    • R, E
  • electron transfer activity
  • electron transporter, transf...


    • S, F
  • electron transfer activity


    • T, G
  • electron transporter, transf...


    • Primary referenceStructure of the cytochrome b6f complex of oxygenic photosynthesis: tuning the cavity., Kurisu G, Zhang H, Smith JL, Cramer WA, Science 2003 Nov 7;302(5647):1009-14. Epub 2003 Oct 2. PMID:14526088
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (295 Kb) [Save to disk]
  • Biological Unit Coordinates (1vf5.pdb1.gz) 281 Kb
  • CSU: Contacts of Structural Units for 1VF5
  • Likely Quarternary Molecular Structure file(s) for 1VF5
  • Structure Factors (831 Kb)
  • Retrieve 1VF5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1VF5 from S2C, [Save to disk]
  • Re-refined 1vf5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1VF5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1vf5] [1vf5_A] [1vf5_B] [1vf5_C] [1vf5_D] [1vf5_E] [1vf5_F] [1vf5_G] [1vf5_H] [1vf5_N] [1vf5_O] [1vf5_P] [1vf5_Q] [1vf5_R] [1vf5_S] [1vf5_T] [1vf5_U]
  • SWISS-PROT database: [P83791] [P83793] [P83792] [P83797] [P83795] [P83796] [P83798] [P83794]

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